Batoms panel

Tip

Panel:

Sidebar region ‣ Batoms

This panel is used to set the overall properties related with Batoms object.

../../_images/gui_batoms.png

Style

Model style

Here, four models are supported.

Space-filling

Ball-and-stick

Polyhedral

Stick

../../_images/batoms_model_style_0.png ../../_images/batoms_model_style_1.png ../../_images/batoms_model_style_2.png ../../_images/batoms_model_style_3.png

Radius style

Supported style are:

  1. Covalent

  2. VDW

  3. Ionic

Radii are imported from ase.data:

https://wiki.fysik.dtu.dk/ase/ase/data.html?highlight=radii#ase.data.covalent_radii

Color style

Supported style are:

  1. JMOL: http://jmol.sourceforge.net/jscolors/#color_U

  2. VESTA: https://jp-minerals.org/vesta/en/

  3. CPK: https://en.wikipedia.org/wiki/CPK_coloring

Polyhedra style

Four polyhedra model are supported.

atoms, bonds and polyhedra

atoms, polyhedra

central atoms, polyhedra

polyhedra

../../_images/batoms_polyhedra_style_0.png ../../_images/batoms_polyhedra_style_1.png ../../_images/batoms_polyhedra_style_2.png ../../_images/batoms_polyhedra_style_3.png

Label

One can add label for each atoms.

You can input string like:

  1. index

  2. specie symbol

  3. charge

Here is a example of CH4 molecule with index label:

../../_images/gui_batoms_2.png

Other parameters:

Scale: change scale for all atoms.

show: show or hide the structure.